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Experiment Data Module
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  Summary Jan, 2007  
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Overview

  • Secure web accessible environment for data storage, analysis and sharing.
  • Capture extensive descriptions about subjects, samples, experiments, protocols and reagents in a novel generic experiment data model.
  • Advanced queries for Experiment details and results.

ImmPort Experiment Data Model

The ImmPort Experiment Data Conceptural Model (pdf) has six components: Subjects, Biological Samples, Protocols, Reagents, Experiments and Experiment Samples. The first five components are commonly used terms in the life sciences. An Experiment Sample is a combination of Biological Sample(s) and Reagent(s) upon which Protocol(s) are applied to generate experiment result(s). Experiment Samples link Experiments, Biological Samples, Reagents and Protocols to experiment results. The ImmPort Experiment Data Model provides a framework to define each component of an experiment and the relationships between the experiment components.

Experiment Data Model

Experiment Component
Experiment Component

Biological Sample Component
Biological Sample Component

Reagent Component
Reagent Component

Experiment Sample Component
Experiment Sample Component

Protocol Component
Protocol Component

Analytical Protocol Component
Analytical Protocol Component

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Research Data Query

The ImmPort Research Data Query tool is a data search component that allows users to search for experiments based on experiment attributes or results attributes

Search based on information about: Search based on type of result:

SimpleSearch - Input
Simple Search - Input Screen Shot

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Simple Search - Output
Simple Search - Output Screen Shot

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Search Based on Experiment Attributes - Input
Search Based on Experiment Attributes - Input Screen Shot

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Search Based on Experiment Attributes - Output
 Search Based on Experiment Attributes - Output Screen Shot

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Search Based on Experiment Attributes - Download Results Files
Search Based on Experiment Attributes - Download Results Files Screen Shot

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Search Based on Gene Expression Microarray Results Attributes - Input
Search Based on Gene Expression Microarray Results Attributes - Input Screen Shot

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Search Based on Gene Expression Microarray Results Attributes - Output
Search Based on Gene Expression Microarray Results Attributes - Output Screen Shot

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